When you want to get to know and love your data

Posts tagged “network enrichment

2014 UC Davis Proteomics Workshop


Recently I had the pleasure of teaching data analysis at the 2014 UC Davis Proteomics Workshop. This included a hands on lab for making gene ontology enrichment networks. You can check out my lecture and tutorial below or download all the material.


Introduction



Tutorial


Creative Commons License
2014 UC Davis Proteomics Workshop Dmitry Grapov is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.

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Enrichment Network


Enrichment is beyond random occurrence within a category. Networks can represent relationships among variables. Enrichment networks display relationships among variables which are over represented compared to random chance.


Next is  a tutorial for making enrichment networks for biological (metabolomic) data in R using the KEGG database.