Rise of Deep Learning for Genomic, Proteomic, and Metabolomic Data Integration in Precision Medicine
Metabolomics and the greater sphere of ‘Omic analyses are a burgeoning set tools for investigation of environmental and organismal mechanisms and interactions. Carrying out data analyses within complex biological system contexts is rewarding but also difficult. The following presentation considers components involved in conducting multivariate data analysis, modeling and visualization within biological contexts.
June 11, 2017 | Categories: Uncategorized | Tags: clustering, data visualization, genomics, lectures, machine learning, metabolomics, network, pathways, proteomics, research, science, software, statistical analysis | Leave a comment
September 19, 2015 | Categories: Uncategorized | Tags: biochemical network, chemical similarity network, data integration, dgrapov, genomics, metabolomics, proteomics, r-bloggers, west coast metabolomics center | 4 Comments
Check out the full article pre-print version.
I recently had the pleasure of giving a presentation on one of my favorite topics, network mapping, and its application to metabolomic and genomic data integration. You can check out the full presentation below.
November 2, 2014 | Categories: Uncategorized | Tags: biochemical network, chemical similarity network, data analysis, data visualization, DeviumWeb, genomics, metabolomics, MetaMapR, network mapping, topological data analysis | Leave a comment
Recently I had the pleasure of teaching statistical and multivariate data analysis and visualization at the annual Summer Sessions in Metabolomics 2014, organized by the NIH West Coast Metabolomics Center.
Similar to last year, I’ve posted all the content (lectures, labs and software) for any one to follow along with at their own pace. I also plan to release videos for all the lectures and labs including use cases for the freely available data analysis software listed below.
You can check out the introduction lecture to the covered material below.
New additions to the course include lecture and lab on Data normalization and updated and improved software.
Stay tuned for videos of all of the material!
2014 Metabolomics Data Analysis and Visualization Tutorials Dmitry Grapov is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
October 11, 2014 | Categories: Uncategorized | Tags: biochemical network, data analysis, data visualization, demo, DeviumWeb, lectures, metabolomics, MetaMapR, r-bloggers, tutorial, west coast metabolomics center, workshop | Leave a comment