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Archive for August, 2014

2014 UC Davis Proteomics Workshop


Recently I had the pleasure of teaching data analysis at the 2014 UC Davis Proteomics Workshop. This included a hands on lab for making gene ontology enrichment networks. You can check out my lecture and tutorial below or download all the material.


Introduction



Tutorial


Creative Commons License
2014 UC Davis Proteomics Workshop Dmitry Grapov is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.


PubChem 446220 = Yeyo

google

I just updated my R package, CTSgetR, for biological database translation using the Chemical Translation Service (CTS). While making code examples I came across some humorous chemical name synonyms for the molecule referenced in PubChem  as CID = 446220. googleBelow are a few examples, can you guess what this is?


Badrock, Bazooka, Bernice, Bernies, Blast, Blizzard, Bouncing Powder, Bump, Burese, C Carrie, Cabello, Candy, Caviar, Cecil, Charlie, Chicken Scratch, Cholly, Coca, Cocktail, Cola, Dama blanca, Dust, Flake, Flex, Florida Snow, Foo Foo, Freeze, Girl, Gold dust, Goofball, Green gold, G-Rock, Happy dust, Happy powder, Happy trails, Heaven, Hell, Jam, Kibbles n’ Bits, Kokan, Kokayeen, Lady, Leaf, Line, Moonrocks, Pimp’s drug, Prime Time, Rock, Sleighride, Snort, Snow (birds), Star dust, Star-spangled powder, Sugar, Sweet Stuff, Toke, Toot, Trails, White girl or lady, Yeyo, Zip